Sunday, May 31, 2020

Difference between gram positive and negative

What is difference between gram positive and negative

 

Most bacteria can be broadly classified as Gram positive or Gram negativeGram positive bacteria have cell walls composed of thick layers of peptidoglycan. Gram positive cells stain purple when subjected to a Gram stain procedure. Gram negative bacteria have cell walls with a thin layer of peptidoglycan.

 

Why is it important to know whether bacteria are gram negative or gram positive?

If bacteria are present, this test can also help your doctor learn if the bacteria are gram negative or gram positive. The difference between gram-negative and gram-positive bacteria can affect their recommended treatment plan.

 

What are gram negative and positive bacteria

 

Gram positive bacteria have a thick peptidoglycan layer and no outer lipid membrane whilst Gram negative bacteria have a thin peptidoglycan layer and have an outer lipid membrane. ... The Gram staining technique was developed in 1884 by Danish bacteriologist Hans Christian Gram

The difference in morphology of cocci and bacilli lies in shape of the bacterium. Cocci and bacilli differ in their shape. Cocci are spherical in shape: whereas bacilli are rod-shaped. ... Both cocci and bacilli may occur singly or in aggregation of two or more and termed accordingly.

Coccus bacteria, known as cocci, are oval-shaped or spherical bacteria. When cocci divide or reproduce they create different patterns, depending on the type. Types of coccus bacteria include Diplococcus bacteria, Streptococcus bacteria, Staphylococcus bacteria and Enterococcus bacteria.

Bacillus (Latin "stick") is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum Firmicutes, with 266 named species. The term is also used to describe the shape (rod) of certain bacteria; and the plural Bacilli is the name of the class of bacteria to which this genus belongs.

What shape are bacilli bacteria

 

Cocci (or coccus for a single cell) are round cells, sometimes slightly flattened when they are adjacent to one another. Bacilli (or bacillus for a single cell) are rod-shaped bacteria. Spirilla (or spirillum for a single cell) are curved bacteria which can range from a gently curved shape to a corkscrew-like spiral.

 

How do you identify cocci bacteria

 

Cocci can grow in pairs, chains, or clusters, depending on their orientation and attachment during cell division. Contrast to many bacilli-shaped bacteria, most cocci bacteria do not have flagella and are non-motile.

 

 

What are the two(2) types of bacteria?

Ø  Spherical: Bacteria shaped like a ball are called cocci, and a single bacterium is a coccus. Examples include the streptococcus group, responsible for “strep throat.”

Ø  Rod-shaped: These are known as bacilli (singular bacillus). ...

Ø  Spiral: These are known as spirilla (singular spirillus).

 








Afb staining Procedure

Ziehl–Neelsen stain

Ziehl-Neelsen staining is a type of acid-fast stain, first introduced by Paul Ehrlich. Ziehl–Neelsen staining is a bacteriological stain used to identify acid-fast organisms, mainly Mycobacteria

                                       

ZN (ZIEHL-NEELSEN)  Stain for AFB (ACID-FAST BACILLI)  Procedure

1.      Fix the smear of the specimen over the glass slide, either by heating or alcohol fixation.

2.      Poor carbol fusion over smear and heat gently until fumes appear. Do not overheat and allow it to stand for 5 minutes, Then wash it off with water.

3.      Pour 20% sulphuric acid, wait for one minute and keep on repeating this stepuntil the slide appears light pink in colour, wash it off with water.

4.      Pour methylene blue, wait for two minutes, again wash with water.

5.      Allow it to air dry and examine under oil immersion lens.

 

Summary of acid-fast stain (Ziehl–Neelsen stain)

Application of

Reagent

Cell colour

Acid fast

Non-acid fast

Primary dye

Carbol fuchsin

Red

Red

Decolorizer

Acid alcohol

Red

Colorless

Counter stain

Methylene blue/malachite green

Red

Blue

 

                                                                                         

Number of afb count in 10 fields

Report / grading

None

Absent

1 to 2

Positive (+)

2 to 10

Positive (++)

10 to 100

Positive (+++)

Above (>) 100

Positive (++++)

 

                                                                             RANDHIR KUMAR

                                                           RDK PARAMEDICAL STUDENT STUDY

Thursday, May 28, 2020

Difference Between Enriched Media and Enrichment Media

Difference Between Enriched Media and Enrichment Media

 

Enriched media contain the nutrients required to support the growth of a wide variety of organisms, including some fastidious ones. They are commonly used to grow as many different types of microbes as are present in the specimen

 Definition

Enriched media refers to the media which contain the nutrients required to support the growth of a wide variety of organisms, including some fastidious ones, while enrichment media refers to the liquid media that inhibits the growth of the unwanted bacteria.

 


Type of Growth

Enriched media allow the growth of a wide variety of microorganisms,while enrichment media allow the growth of a particular type of microorganism in the medium. Thus, this is the main difference between enriched media and enrichment media.

 

Solid or Liquid

Apart from that, an important difference between enriched media and enrichment media is that enriched media are solid media as they are agar-based while enrichment media are liquid media.

 

Composition

Moreover, enriched media contain extra nutrients in the form of egg yolk, blood, serum, etc. in addition to the basal medium while enrichment media contain added antibiotics, dyes, chemicals or altered pH. Hence, this is also a difference between enriched media and enrichment media.

 

Purpose

The purpose of each is another important difference between enriched media and enrichment media. That is; the enriched media facilitate the growth of fastidious microorganisms while the enrichment media inhibit the growth of unwanted commensal or contaminating bacteria.

 

Examples

Some examples of enriched media are blood agar, chocolate agar, Loeffler’s serum, etc. while Selenite F broth, tetrathionate broth, alkaline peptone water (APW), etc. are the examples of enrichment media.

 

Conclusion

Enriched media are a type of agar-based media which allow the growth of a wide variety of microorganisms including fastidious organisms. Generally, enriched media are solid media. In contrast, enrichment media are liquid media, which inhibit the growth of unwanted microorganisms in the media. Therefore, the main difference between enriched media and enrichment media is the type of microorganisms.

 

Explanation

Enriched media contain the nutrients required to support the growth of a wide variety of organisms, including some fastidious ones.

They are commonly used to grow as many different types of microbes as are present in the specimen.

 






Monday, May 25, 2020

Study of Indole tes

                              Indole tes

Indol test is the biochemical test .This test detection of indoles such as LSD, see Ehrlich's reagent.

The indole test is a biochemical test performed on bacterial species to determine the ability of the organism to convert tryptophan into indole. This division is performed by a chain of a number of different intracellular enzymes, a system generally referred to as "tryptophanase.

 

Indole is generated by reductive deamination from tryptophan via the intermediate molecule indolepyruvic acid. Tryptophanase catalyzes the deamination reaction, during which the amine (-NH2) group of the tryptophan molecule is removed. Final products of the reaction are indole, pyruvic acidammonium (NH4+) and energy. Pyridoxal phosphate is required as a coenzyme. 

A positive result is shown by the presence of a red or red-violet color in the surface alcohol layer of the broth. A negative result appears yellow. A variable result can also occur, showing an orange color as a result. This is due to the presence of skatole, also known as methyl indole or methylated indole, another possible product of tryptophan degradation.

The positive red color forms as a result of a series of reactions. The para-Dimethylaminobenzaldehyde reacts with indole present in the medium to form a red rosindole dye. The isoamyl alcohol forms a complex with rosindole dye, which causes it to precipitate. The remaining alcohol and the precipitate then rise to the surface of the medium.

 

 

Indole-Positive Bacteria

Bacteria that test positive for cleaving indole from tryptophan include: Aeromonas hydrophilaAeromonas punctataBacillus alveiEdwardsiella sp., Escherichia coliFlavobacterium sp., Haemophilus influenzaeKlebsiella oxytocaProteus sp. (not P. mirabilis and P. penneri), Plesiomonas shigelloidesPasteurella multocidaPasteurella pneumotropicaEnterococcus faecalisVibrio sp., and Lactobacillus reuteri.

 

Indole-Negative Bacteria

Bacteria which give negative results for the indole test include: Actinobacillus spp., Aeromonas salmonicidaAlcaligenes sp., most Bacillus sp., Bordetella sp., Enterobacter sp., most Haemophilus sp., most Klebsiella sp., Neisseria sp., Mannheimia haemolyticaPasteurella ureaeProteus mirabilisP. penneriPseudomonas sp., Salmonella sp., Serratia sp., Yersinia sp., and Rhizobium sp.

The Indole test is one of the four tests of the IMViC series, which tests for evidence of an enteric bacterium. The other three tests include: the methyl red test [M], the Voges–Proskauer test [V] and the citrate test.

 

In the spot test, indole combines, in the filter paper matrix, at an acid pH with p-Dimethylaminocinnamaldehyde (DMACA) to produce a blue to blue-green compound. Indole Spot Reagent has been reported to be useful in detecting indole production by members of the family Enterobacteriaceae and certain anaerobic species.

Reagents Used in Indole Test

Indole Spot Reagent:

p-Dimethylaminocinnamaldehyde (DMACA)

10.0 gm

Hydrochloric Acid, 37%

100.0 ml

Deionized Water

900.0 ml

 

Indole Kovacs Reagent:

p-Dimethylaminobenzaldehyde

50.0 gm

Hydrochloric Acid, 37%

250.0 ml

Amyl Alcohol

750.0 ml

 

Procedure of Indole Test

  1. Take a sterilized test tubes containing 4 ml of tryptophan broth.
  2. Inoculate the tube aseptically by taking the growth from 18 to 24 hrs culture.
  3. Incubate the tube at 37°C for 24-28 hours.
  4. Add 0.5 ml of Kovac’s reagent to the broth culture.
  5. Observe for the presence or absence of ring.

Indole Spot Reagent (DMACA) Procedure

1.    Place several drops of Indole Spot Reagent on a piece of filter paper.

2.    With an inoculating loop or wooden applicator stick, pick a portion of an 18-24 hour isolated colony from a non-selective media and rub it onto the reagent saturated area of the filter paper.

3.    Examine immediately

Positive: Formation of a pink to red color (“cherry-red ring”) in the reagent layer on top of the medium within seconds of adding the reagent.

Examples:  Aeromonas hydrophilaAeromonas punctataBacillus alvei,Edwardsiella sp., Escherichia coliFlavobacterium sp., Haemophilus influenzaeKlebsiella oxytocaProteus sp. (not P. mirabilis and P. penneri), Plesiomonas shigelloides,Pasteurella multocidaPasteurella pneumotropicaEnterococcus faecalis, and Vibrio sp.

Negative: No color change even after the addition of appropriate reagent.
Examples: Actinobacillus spp., Aeromonas salmonicidaAlcaligenes sp., most Bacillus sp., Bordetella sp., Enterobacter sp., Lactobacillus spp., most Haemophilus sp., most Klebsiella sp., Neisseria sp., Pasteurella haemolyticaPasteurella ureaeProteus mirabilisP. penneriPseudomonas sp.,Salmonella sp., Serratia sp., Yersinia sp.

Indole Spot Reagent Result

Positive reaction: The development of a blue colour within 3 minutes.
Negative reaction: The development of a pink colour within 3 minutes.

 

Method

      i.        Place several drops of 1% p-dimethylaminocinnamaldehyde reagent on a piece of filter paper until saturation.

    ii.        With an inoculating loop or wooden applicator stick, pick a portion of an 18-24 hour isolated colony from a non-selective media and rub it onto the reagent saturated area of the filter paper.

   iii.        Observe for colour development within 1 to 3 minutes.

 

Expected Results

Ø  Positive: A positive reaction is denoted by the appearance of a blue to blue-green color change on the bacterial smear within 2-3 minutes.

Ø  Negative: Negative reactions remain colorless or light pink.
Note: Positive reaction is Red-violet in the case of Providencia alcalifaciens.

 

Note :-

  1. Indole tests may be used as an aid in the identification and differentiation of gram-positive and gram-negative organisms.
  2. Additional biochemical testing using pure cultures is recommended for complete identification.
  3. The tube test is a more sensitive method of detecting indole test.
  4. Kovacs Indole Reagent may be used as a substitute for the spot test reagent. However, Kovacs Indole Reagent, when used as the spot test reagent, is less sensitive in detecting indole than the Indole Spot Reagent (DMACA).
  5. Kovacs Indole Reagent is not recommended for use with anaerobic bacteria. The Indole Spot Reagent (DMACA) is suitable for anaerobe use.
  6. Since peptones have been shown to vary with regard to their suitability for use with indole testing, media selected for indole determination should be tested with known positive and negative organisms to insure suitability.
  7. Media containing glucose should not be used for indole testing due to the formation of acid end products which have been shown to reduce indole production. Mueller Hinton Agar should also not be used for this test because tryptophan is destroyed during acid hydrolysis of casein.
  8. Media containing dye, such as MacConkey and EMB, are unsuitable sources of inoculum due to possible carryover of dye and subsequent interference of indole color interpretation.
  9. Indole-positive colonies have been reported to cause adjacent indole-negative colonies to appear false-positive due to diffusion of indole into the media. To avoid false-positives, select colonies of different morphologies that are separated by at least 5mm for indole testing.

 





Saturday, May 23, 2020

Alternate of Coagulase test

                               Alternate of Coagulase test

 

Both coagulase tests detect the enzymes that convert fibrinogen into fibrin. Human, rabbit or sheep pooled plasma is used as substrate for both tests. Slide coagulase test is simpler and faster as compared to tube coagulase test. The plasma could be carrier of many human and animal pathogens like HIV, HBV, HCV etc                    

Improperly stored plasma can lead to false positive or negative results. Citrated plasma may be unsuitable for this test if contaminated with citrate utilizing bacteria.

 



DNA-ase test:

 

This test is used to help in the identification of S. aureus which produces deoxyribonuclease (DNA-ase) enzymes. The DNA-ase test is particularly useful when plasma is not available to perform a coagulase test or when the results of a coagulase test are difficult to interpret.

 

Principle:

Deoxyribonuclease hydrolyzes deoxyribonucleic acid (DNA).The test organism is cultured on a medium which contains DNA. After overnight incubation, the colonies are tested for DNA-ase production by flooding the plate with a weak hydrochloric acid solution. The acid precipitates unhydrolyzed DNA. DNA-ase-producing colonies are therefore surrounded by clear areas due to DNA hydrolysis.

 

Required:

— DNA-ase agar plate No. 33 Up to six organisms may be tested on the same plate.

— Hydrochloric acid Reagent No. 431 mol/1 (1 N)

 

Method:

1 Divide a DNA-ase plate into the required number of strips by marking the underside of the plate.

2 Using a sterile loop or swab, spot-inoculate the test and control organisms. Make sure each test area is labelled clearly.

3 Incubate the plate at 35–37 C overnight.

4 Cover the surface of the plate with 1mol/l hydrochloric acid solution. Tip off the excess acid.

5 Look for clearing around the colonies within 5minutes of adding the acid.

 

Results:

*Clearing around the colonies . . . . .  . . DNA-ase positive strain.

*No clearing around the colonies . . . . . . . . DNA-asenegative strain

 

Note: Some methicillin resistant S. aureus (MRSA)strains give a negative DNA-ase test. Some coagulase negative staphylococci are weakly positive. 

Also, S. pyogenes, Moraxella and Serratia speciesfrequently give a positive DNA-ase test.

 

Controls:

*Positive DNA-ase control: 

Staphylococcus aureus.

*Negative DNA-ase control:

Staphylococcus epidermidis.

 


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